Files
lazarus-ccr/applications/lazstats/source/forms/analysis/nonparametric/lifetableunit.pas
2021-05-09 18:05:59 +00:00

446 lines
11 KiB
ObjectPascal

unit LifeTableUnit;
{$mode objfpc}{$H+}
interface
uses
Classes, SysUtils, FileUtil, LResources, Forms, Controls, Graphics, Dialogs,
StdCtrls, Buttons, ExtCtrls, Grids,
MainUnit, Globals, FunctionsLib, GraphLib, BasicStatsParamsFormUnit;
type
{ TLifeTableForm }
TLifeTableForm = class(TBasicStatsParamsForm)
Bevel1: TBevel;
CIEdit: TEdit;
Label7: TLabel;
NoCensoredEdit: TEdit;
Label6: TLabel;
NoDiedEdit: TEdit;
Label5: TLabel;
NoAliveEdit: TEdit;
Label4: TLabel;
ObsEndEdit: TEdit;
Label3: TLabel;
ObsStartEdit: TEdit;
Label2: TLabel;
ObsStartInBtn: TBitBtn;
ObsEndInBtn: TBitBtn;
AliveInBtn: TBitBtn;
NoDiedInBtn: TBitBtn;
NoCensoredInBtn: TBitBtn;
ObsStartOutBtn: TBitBtn;
ObsEndOutBtn: TBitBtn;
AliveOutBtn: TBitBtn;
NoDiedOutBtn: TBitBtn;
NoCensoredOutBtn: TBitBtn;
Panel2: TPanel;
Label1: TLabel;
Grid: TStringGrid;
Splitter1: TSplitter;
VarList: TListBox;
procedure AliveInBtnClick(Sender: TObject);
procedure AliveOutBtnClick(Sender: TObject);
procedure FormCreate(Sender: TObject);
procedure GridPrepareCanvas(Sender: TObject; ACol, aRow: Integer;
AState: TGridDrawState);
procedure NoCensoredInBtnClick(Sender: TObject);
procedure NoCensoredOutBtnClick(Sender: TObject);
procedure NoDiedInBtnClick(Sender: TObject);
procedure NoDiedOutBtnClick(Sender: TObject);
procedure ObsEndInBtnClick(Sender: TObject);
procedure ObsEndOutBtnClick(Sender: TObject);
procedure ObsStartInBtnClick(Sender: TObject);
procedure ObsStartOutBtnClick(Sender: TObject);
procedure VarListDblClick(Sender: TObject);
procedure VarListSelectionChange(Sender: TObject; User: boolean);
private
{ private declarations }
protected
procedure AdjustConstraints; override;
procedure Compute; override;
procedure UpdateBtnStates; override;
function Validate(out AMsg: String; out AControl: TWinControl): Boolean; override;
public
procedure Reset; override;
end;
var
LifeTableForm: TLifeTableForm;
implementation
{$R *.lfm}
uses
Math,
GridProcs;
{ TLifeTableForm }
procedure TLifeTableForm.AdjustConstraints;
begin
ParamsPanel.Constraints.MinWidth :=
MaxValue([
Label2.Canvas.TextWidth(Label2.Caption),
Label3.Canvas.TextWidth(Label3.Caption),
Label4.Canvas.TextWidth(Label4.Caption),
Label5.Canvas.TextWidth(Label5.Caption),
Label6.Canvas.Textwidth(Label6.Caption),
Label7.canvas.TextWidth('Confidence Level') + Label7.BorderSpacing.Right + CIEdit.Width]) * 2 +
ObsStartInBtn.Width + VarList.BorderSpacing.Right * 2;
ParamsPanel.Constraints.MinHeight :=
CIEdit.Top + CIEdit.Height + CIEdit.BorderSpacing.Bottom +
ButtonBevel.Height +
CloseBtn.BorderSpacing.Top + CloseBtn.Height;
end;
procedure TLifeTableForm.AliveInBtnClick(Sender: TObject);
var
index: integer;
begin
index := VarList.ItemIndex;
if (index > -1) and (NoAliveEdit.Text = '') then
begin
NoAliveEdit.Text := VarList.Items[index];
VarList.Items.Delete(index);
end;
UpdateBtnStates;
end;
procedure TLifeTableForm.AliveOutBtnClick(Sender: TObject);
begin
if NoAliveEdit.Text <> '' then
begin
VarList.Items.Add(NoAliveEdit.Text);
NoAliveEdit.Text := '';
end;
UpdateBtnStates;
end;
procedure TLifeTableForm.Compute;
var
varcols: IntDyneVec = nil;
i: integer;
AtRisk, ProbDie, CumProbLive, StdErr, Up95, Low95: double;
N, P, Q, mu, CI, z: double;
begin
CI := StrToFloat(CIEdit.Text);
z := InverseZ(CI);
SetLength(varcols, 5);
for i := 1 to 5 do
begin
if (OS3MainFrm.DataGrid.Cells[i,0] = ObsStartEdit.Text) then varcols[0] := i;
if (OS3MainFrm.DataGrid.Cells[i,0] = ObsEndEdit.Text) then varcols[1] := i;
if (OS3MainFrm.DataGrid.Cells[i,0] = NoAliveEdit.Text) then varcols[2] := i;
if (OS3MainFrm.DataGrid.Cells[i,0] = NoDiedEdit.Text) then varcols[3] := i;
if (OS3MainFrm.DataGrid.Cells[i,0] = NoCensoredEdit.Text) then varcols[4] := i;
end;
Grid.RowCount := NoCases + Grid.FixedRows;
for i := 1 to NoCases do
begin
Grid.Cells[0,i] := 'CASE ' + IntToStr(i);
Grid.Cells[1,i] := Trim(OS3MainFrm.DataGrid.Cells[varcols[0],i]);
Grid.Cells[2,i] := Trim(OS3MainFrm.DataGrid.Cells[varcols[1],i]);
Grid.Cells[3,i] := Trim(OS3MainFrm.DataGrid.Cells[varcols[2],i]);
Grid.Cells[4,i] := Trim(OS3MainFrm.DataGrid.Cells[varcols[3],i]);
Grid.Cells[5,i] := Trim(OS3MainFrm.DataGrid.Cells[varcols[4],i]);
end;
for i := 1 to NoCases do
begin
AtRisk := StrToFloat(Grid.Cells[3,i]);
AtRisk := AtRisk - (StrToFloat(Grid.Cells[5,i]) / 2.0);
Grid.Cells[6,i] := Format('%.4f', [AtRisk]);
ProbDie := StrToFloat(Grid.Cells[4,i]) / AtRisk;
Grid.Cells[7,i] := Format('%.4f', [ProbDie]);
Grid.Cells[8,i] := Format('%.4f', [1.0-ProbDie]);
end;
N := StrToFloat(Grid.Cells[3,1]);
Grid.Cells[9,1] := Grid.Cells[8,1];
P := StrToFloat(Grid.Cells[9,1]);
Q := 1.0 - P;
StdErr := sqrt(N * P * Q);
Grid.Cells[10,1] := Format('%.4f', [StdErr]);
mu := N * P;
Grid.Cells[10,1] := Format('%.4f', [StdErr]);
Up95 := mu + z * StdErr;
Low95 := mu - z * StdErr;
Grid.Cells[11,1] := Format('%.4f', [Low95]);
Grid.Cells[12,1] := Format('%.4f', [Up95]);
for i := 2 to NoCases do
begin
CumProbLive := StrToFloat(Grid.Cells[9,i-1]) * StrToFloat(Grid.Cells[8,i]);
Grid.Cells[9,i] := Format('%.4f', [CumProbLive]);
P := CumProbLive;
Q := 1.0 - P;
StdErr := sqrt(N * P * Q);
mu := N * P;
Grid.Cells[10,i] := Format('%.4f', [StdErr]);
Up95 := mu + z * StdErr;
Low95 := mu - z * StdErr;
Grid.Cells[11,i] := Format('%.4f', [Low95]);
Grid.Cells[12,i] := Format('%.4f', [Up95]);
end;
end;
procedure TLifeTableForm.FormCreate(Sender: TObject);
begin
Assert(OS3MainFrm <> nil);
CIEdit.Text := FormatFloat('0.00', DEFAULT_CONFIDENCE_LEVEL_PERCENT * 0.01);
end;
procedure TLifeTableForm.GridPrepareCanvas(sender: TObject; aCol,
aRow: Integer; aState: TGridDrawState);
var
ts: TTextStyle;
begin
if aRow > 0 then begin
ts := Grid.Canvas.TextStyle;
ts.Alignment := taRightJustify;
Grid.Canvas.TextStyle := ts;
end;
end;
procedure TLifeTableForm.NoCensoredInBtnClick(Sender: TObject);
var
index: integer;
begin
index := VarList.ItemIndex;
if (index > -1) and (NoCensoredEdit.Text = '') then
begin
NoCensoredEdit.Text := VarList.Items[index];
VarList.Items.Delete(index);
end;
UpdateBtnStates;
end;
procedure TLifeTableForm.NoCensoredOutBtnClick(Sender: TObject);
begin
if NoCensoredEdit.Text <> '' then
begin
VarList.Items.Add(NoCensoredEdit.Text);
NoCensoredEdit.Text := '';
end;
UpdateBtnStates;
end;
procedure TLifeTableForm.NoDiedInBtnClick(Sender: TObject);
var
index: integer;
begin
index := VarList.ItemIndex;
if (index > -1) and (NoDiedEdit.Text = '') then
begin
NoDiedEdit.Text := VarList.Items[index];
VarList.Items.Delete(index);
end;
UpdateBtnStates;
end;
procedure TLifeTableForm.NoDiedOutBtnClick(Sender: TObject);
begin
if NoDiedEdit.Text <> '' then
begin
VarList.Items.Add(NoDiedEdit.Text);
NoDiedEdit.Text := '';
end;
UpdateBtnStates;
end;
procedure TLifeTableForm.ObsEndInBtnClick(Sender: TObject);
var
index: integer;
begin
index := VarList.ItemIndex;
if (index > -1) and (OBsEndEdit.Text = '') then
begin
ObsEndEdit.Text := VarList.Items[index];
VarList.Items.Delete(index);
end;
UpdateBtnStates;
end;
procedure TLifeTableForm.ObsEndOutBtnClick(Sender: TObject);
begin
if ObsEndEdit.Text <> '' then
begin
VarList.Items.Add(ObsEndEdit.Text);
ObsEndEdit.Text := '';
end;
UpdateBtnStates;
end;
procedure TLifeTableForm.ObsStartInBtnClick(Sender: TObject);
var
index: integer;
begin
index := VarList.ItemIndex;
if (index > -1) and (ObsStartEdit.Text = '') then
begin
ObsStartEdit.Text := VarList.Items[index];
VarList.Items.Delete(index);
end;
UpdateBtnStates;
end;
procedure TLifeTableForm.ObsStartOutBtnClick(Sender: TObject);
begin
if ObsStartEdit.Text <> '' then
begin
VarList.Items.Add(ObsStartEdit.Text);
ObsStartEdit.Text := '';
end;
UpdateBtnStates;
end;
procedure TLifeTableForm.Reset;
var
i, j: integer;
begin
ObsStartEdit.Text := '';
ObsEndEdit.Text := '';
NoAliveEdit.Text := '';
NoDiedEdit.Text := '';
NoCensoredEdit.Text := '';
Grid.RowCount := 2; //NoCases + Grid.FixedRows;
Grid.ColCount := 13;
Grid.Cells[1,0] := 'Obs.Start';
Grid.Cells[2,0] := 'Obs.End';
Grid.Cells[3,0] := 'Alive';
Grid.Cells[4,0] := 'Died';
Grid.Cells[5,0] := 'Censored';
Grid.Cells[6,0] := 'At Risk';
Grid.Cells[7,0] := 'Prob.Die';
Grid.Cells[8,0] := 'Prob.Alive';
Grid.Cells[9,0] := 'Cum.P.Alive';
Grid.Cells[10,0] := 'S.E. Alive';
Grid.Cells[11,0] := 'Low 95%';
Grid.Cells[12,0] := 'Hi 95%';
for i := 0 to 12 do Grid.Cells[i, 1] := '';
// for j := 1 to NoCases do Grid.Cells[i,j] := '';
CollectVariableNames(OS3MainFrm.DataGrid, VarList.Items);
UpdateBtnStates;
end;
procedure TLifeTableForm.UpdateBtnStates;
begin
ObsStartInBtn.Enabled := (VarList.ItemIndex > -1) and (ObsStartEdit.Text = '');
ObsEndInBtn.Enabled := (VarList.ItemIndex > -1) and (ObsEndEdit.Text = '');
AliveInBtn.Enabled := (VarList.ItemIndex > -1) and (NoAliveEdit.Text = '');
NoDiedInBtn.Enabled := (VarList.itemIndex > -1) and (NoDiedEdit.Text = '');
NoCensoredInBtn.Enabled := (VarList.ItemIndex > -1) and (NoCensoredEdit.Text = '');
ObsStartOutBtn.Enabled := (ObsStartEdit.Text <> '');
ObsEndOutBtn.Enabled := (ObsEndEdit.Text > '');
AliveOutBtn.Enabled := (NoAliveEdit.Text <> '');
NoDiedOutBtn.Enabled := (NoDiedEdit.Text <> '');
NoCensoredOutBtn.Enabled := (NoCensoredEdit.Text > '');
end;
function TLifeTableForm.Validate(out AMsg: String; out AControl: TWinControl): Boolean;
begin
Result := false;
if ObsStartEdit.Text = '' then
begin
AMsg := 'Observation Start not specified.';
AControl := ObsStartEdit;
exit;
end;
if ObsEndEdit.Text = '' then
begin
AMsg := 'Observation End not specified.';
AControl := ObsEndEdit;
exit;
end;
if NoAliveEdit.Text = '' then
begin
AMsg := 'Number Alive not specified.';
AControl := NoAliveEdit;
exit;
end;
if NoDiedEdit.Text = '' then
begin
AMsg := 'Number Died not specified.';
AControl := NoDiedEdit;
exit;
end;
if NoCensoredEdit.Text = '' then
begin
AMsg := 'Number Censored not specified.';
AControl := NoCensoredEdit;
exit;
end;
Result := true;
end;
procedure TLifeTableForm.VarListDblClick(Sender: TObject);
var
index: Integer;
s: String;
begin
index := VarList.ItemIndex;
if index > -1 then
begin
s := VarList.Items[index];
if ObsStartEdit.Text = '' then
ObsStartEdit.Text := s
else if ObsEndEdit.Text = '' then
ObsEndEdit.Text := s
else if NoAliveEdit.Text = '' then
NoAliveEdit.Text := s
else if NoDiedEdit.Text = '' then
NoDiedEdit.Text := s
else if NoCensoredEdit.Text = '' then
NoCensoredEdit.Text := s
else
exit;
VarList.Items.Delete(index);
UpdateBtnStates;
end;
end;
procedure TLifeTableForm.VarListSelectionChange(Sender: TObject; User: boolean);
begin
UpdateBtnStates;
end;
end.